Students’ Publications
(Names of MBBE Graduate students are shown in bold)
2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 20002006
Andres, M.A., F.P., Bellinger, W.Y. Chan, I. Cook, L.K. Davis, B. K. Fox, E.G. Grau, and T. Hirano (2006) Ionotropic glutamate receptor activation increases intracellular calcium in prolactin-releasing cells of the adenohypophysis. American Journal of Physiology-Endocrinology and Metabolism (in press).
Bellinger,F.P., B.K. Fox, W.Y. Chan, L.K. Davis, Andres, M.A., T. Hirano , E.G. Grau, and I. Cook (2006) Ionotropic Glutamate Receptor Activation Increases Intracellular Calcium In Prolactin-Releasing Cells Of The Adenohypophysis. American Journal of Physiology-Endocrinology and Metabolism 291(6):E1188-96.
Cheng, J.Z.; Harada, R.; Campbell, S.; Li, Q.X. (2006) Biodegradation of dinitrotoluene by Pseudoxanthomonas sp. JA40. J. Young Investigators. (in press).
Denery, R.J.; Cooney, J.M.; Li, Q.X. (2006) Metabolic profiling to reflect gene expression in Streptomyces tenjimariensis. Industrial Biotechnology. 2(1):51-54.
Doyle, R.W., D.R. Moss, and S.M. Moss. 2006. Shrimp copyright: inbreeding strategies effective against illegal copying of genetically improved shrimp. Global Aquaculture Advocate, 9(2): 76-79.
Dragull K, Lin GD, Tang CS (2006). Chemistry, pharmacology and Safety aspects of Kava. In: "Hawaiian 'Awa: Views of an Ethnobotanical Treasure" Johnston E and Rogers H, eds, pp. 19-29. Assoc. for Hawaiian 'Awa Publication, Hilo, HI.
Fox B. K., L. G. Riley, H. Kaiya, T. Hirano and E. G. Grau (2006) Effects of homologous ghrelins on the growth hormone/insulin-like growth factor-I axis in the tilapia, Oreochromis mossambicus. Zoological Science (in press).
Fox B. K., L. G. Riley, T. Hirano and E. G. Grau (2006) Effects of fasting on growth hormone, growth hormone receptor and insulin-like growth factor-I axis in seawater-acclimated tilapia, Oreochromis mossambicus. General and Comparative Endocrinology 148(3):340-7.
Fox B. K., Tadaomi Naka, Koji Inoue, Yoshio Takei, Tetsuya Hirano and E. Gordon Grau (2006) In vitro effects of homologous natriuretic peptides on growth hormone and prolactin release in the tilapia, Oreochromis mossambicus. General and Comparative Endocrinology (in press).
Harada, R.M.; Campbell, S.; Li, Q.X. (2006) Pseudoxanthomonas kalamensis sp. nov., a novel gammaproteobacterium isolated from Johnston Atoll, North Pacific Ocean. Int J Syst Evol Microbiol. 56:1103-1107.
Jhoo JW, Freeman JP, Heinze TM, Moody JD, Schnackenberg LK, Beger RD, Dragull K, Tang CS, Ang CY (2006). In vitro cytotoxicity of nonpolar constituents from different parts of kava plant (Piper methysticum). J Agric Food Chem 54(8):3157-3162.
Jube S, and Borthakur D (2006) Recent advances in food biotechnology research. In: Hui YH, Nip W-K, Nollet LML, Paliyath G, Sahlstrøm S, and Simpson BK (eds) Food Biochemistry and Food Processing. pp 35-70, Blackwell Publishing, Oxford, U.K.
Kim, H.-J.; Shelver, W.L.; Hwang, E.-C.; Xu, T.; Li, Q.X. (2006) Automated flow fluorescent immunoassay for part per trillion detection of the neonicotinoid insecticide thiamethoxam. Analytica Chimica Acta 571 (1):66-73.
Kubota R, Jenkin D M, Vine B, Alvarez A (2006) Loop mediated isothermal application of a flagelar gene for discriminating different biovars of Ralstonia solanacearum (in preparation for Phytopathology)
Lai, Chun Wan J., Yu, Qingyi, Hou, Shaobin, Skelton, Rachel L., Jones, Meghan R., Lewis, Kanako L. T., Murray, Jan, Eustice, Moriah, Guan, Peizhu, Agbayani, Ricelle, Moore, Paul H., Ming, Ray, and Presting, Gernot G. (2006) Analysis of papaya BAC end sequences reveals first insights into the organization of a fruit tree genome. Mol Genetics Genomics 276:1-12.
Leary JK, Hue NV, Singleton PW, D. Borthakur (2006) Soil acidification, nutrient depletion, and symbiotic nitrogen fixation are the major features of gorse (Ulex europaeus) infestation on volcanic soils in Hawaii. Biol. Fertility Soils 42: 215-223. Published online: 28 June 2005
Leary JK, Singleton PW, Scowcroft PG, Borthakkur D (2006) Symbiotic diversity in the cosmopolitan genus Acacia. Symbiosis 41 (3): 107-117
Li RW, Douglas TD, Maiyoh GK, Adeli K, Theriault AG (2006) Green tea leaf extract improves lipid and glucose homeostasis in a fructose-fed insulin resistant hamster model. J Ethnopharm 104: 24-31.
Lu D-P, and D.A. Christopher, Immunolocalization of a protein disulfide isomerase to Arabidopsis thaliana chloroplasts and its association with starch biogenesis. International Journal of Plant Sciences 167 (1): 1-9 (2006).
Luce A, Sharma A, Mollere O, Nagaki K, Jiang J, Presting G, Dawe RK. (2006) Precise centromere mapping using a combination of repeat junction markers and ChIP-PCR. Genetics (in press).
Ming, R., Yu, Q. , and Moore, P.H. (2006) Review: sex determination in papaya. Seminars Cell Devel. Biol. (in press).
Moss D.R. and S.M. Moss. (2006) Effects of gender and size on feed acquisition in the Pacific white shrimp Litopenaeus vannamei. Journal of the World Aquaculture Society, 37(2):161-167.
Muranyi M, Ding C, He Q, Lin Y, Li PA (2006) Streptozotocin-induced diabetes causes astrocyte death after ischemia and reperfusion injury. Diabetes. 55: 349-355
Nerurkar PV, Lee YK, Linden EH, Lim S, Pearson L, Frank J and Nerurkar VR (2006) Lipid lowering effects of Momordica charantia (bitter melon) on cellular lipids and apolipoproteins in protease inhibitor-treated human hepatoma cells. British J Pharmacology, 2006; 148:1156-1164.
Peckham, G. D., Bugos, R.C., Su, W.W. (2006) Purification of GFP fusion proteins from transgenic plant cell cultures. Protein Expr. Purif. 49: 183-189.
Seo, J.S., Keum, Y.S., Cho, I.K., Li, Q.X. (2006) Degradation of dibenzothiophene and carbazole by Arthrobacter sp. P1-1. Int. Biodeterioration & Biodeg. 58:36-43.
Seo, J.S., Keum, Y.S., Hu, Y., Lee, S.E., Li, Q.X. (2006) Degradation of phenanthrene by Burkholderia sp. C3: initial 1,2- and 3,4-dioxygenation and meta- and ortho-cleavage of naphthalene-1,2-diol. Biodegradation. (in press). DOI 10.1007/s10532-006-9048-8.
Seo, J.S., Keum, Y.S., Hu, Y., Lee, S.E., Li, Q.X. (2006) Phenanthrene degradation in Arthrobacter sp. P1-1: Initial 1,2-, 3,4- and 9,10-dioxygenation, and meta- and ortho-cleavages of naphthalene-1,2-diol after its formation from naphthalene-1,2-dicarboxylic acid and hydroxyl naphthoic acids. Chemosphere (in press). DOI: 10.1016/j.chemosphere.2006.04.067.
Skelton, R. L., Yu, Q, Srinivasan, R., Manshardt, R., Moore, P. H., and Ming, R. Tissue differential expression of Lycopene ß-cyclase gene in papaya. Cell Research 731-739. 2006.
Verma S, Ziegler K, Ananthula P, Co JK-G, Frisque RJ, Yanagihara R, Nerurkar VR (2006) JC virus induces altered patterns of cellular gene expression: Interferon-inducible genes as major transcriptional targets. Virology 345:457-467.
Zhu, Y. J, Agbayani, R, Tang, CS, Moore, PH (2006) Developing transgenic papaya to improve broad disease resistance. Horticulturea Acta (in press).
2005Ako H, Shimizu E, de Lemos K, Asano L, and Tamaru C (2005) Behavior limitations of high density fish growout. World Aquaculture 36:25-29, 67
Awaya JD, Fox PM, Borthakur D (2005) pyd genes of Rhizobium sp. strain TAL1145 are required for degradation of 3-hydroxy-4-pyridone, an aromatic intermediate in mimosine metabolism. J. Bacteriol. 187 (13): 4480-4487.
Casaschi A, Maiyoh GK, Khosrow A, Theriault AG (2005) Increased Diacylglycerol Acyltransferase (DGAT) Activity is Associated with Triglyceride Accumulation in Tissues of Diet-induced Insulin Resistant Hyperlipidemic Hamsters. Metabolism 2005; 54: 403-409.
Delanoy, G.; Li, Q.X.; Yu, J. (2005) Activity and stability of laccase in conjugation with chitosan. Int’l J. of Biological Macromolecules. 35(1-2): 89-95.
Hong, S.-M.; Atkinson, S.; Hülck, K. ; Li, Q.X. (2005) PCB concentrations and profiles in tissues of Stellar sea lions from Alaska and the Bering Sea. Eds.: Thomas R. Loughlin, Shannon Atkinson and Donald G. Calkins. Synopsis of Research on Steller Sea Lions: 2001-2005. Alaska SeaLife Center. p110-120.
Keum, Y.-S.; Seo, J.-S.; Li, Q.X. (2005) Synthesis of bacterial metabolites of polycyclic aromatic hydrocarbons: benzochromenones, o-carboxyvinylnaphthoates, and o-substituted aryl-?-oxobutenoates. Synthetic Communications. 35:2685-2693.
Li X. L. , T. Borsics, H.M. Harrington, D.A. Christopher (2005) Arabidopsis AtCNGC10 rescues potassium channel mutants of E. coli, yeast and Arabidopsis and is regulated by calcium/calmodulin and cyclic GMP in E. coli. Functional Plant Biology 32:643-653.
Lu D-P, and D.A. Christopher (2005) Analysis of isoforms of protein disulfide isomerase in plants by immuno-microscopy. Microscopy & Microanalysis, 11 (S2):1160-1161
Riley, L. G., Fox, B. K. , Kaiya, H., Hirano, T., and E.G. Grau (2005) Long-term treatment of ghrelin stimulates feeding, fat deposition, and alters the GH/IGF-I axis in the tilapia, Oreochromis mossambicus. General and Comparative Endocrinology 142: 234-40.
Shelver, W.L.; Kim, H.-J.; Li, Q.X. (2005) Development of monoclonal antibody based ELISA for the ?-adrenergic agonist zilpaterol. J. Agric. Food Chem. 53: 3273-3280.
Shelver, W.L.; Keum, Y.-S.; Kim, H.-J.; Rutherford, Drew; Hakk, Heldur H.; Bergman, Ake; Li, Q.X. (2005) Hapten syntheses and antibody generation for the development of polybrominated flame retardants ELISA. J. Agric. Food Chem. 53 (10): 840-3847.
Stroncek, J.; Denery, J.R. ; Li, Q.X. (2005) Relationship between gene expression and cell metabolism in the marine bacterium Streptomyces tenjimariensis. J. Young Investigators (online) 12 (4): http://www.jyi.org/research/re.php?id=142.
Su, W.W., Liu, B., Lu, W.B., Xu, N.S., Du, G.C., Tan, J.L. (2005) Observer-based online compensation of inner filter effect in monitoring fluorescence of GFP-expressing plant cell cultures. Biotechnol. Bioeng. 91 (2), 213-226.
Wang, D.; Atkinson, S.; Huelck, K.; Li, Q.X. (2005) Polychlorinated biphenyls in eggs of Spectacled Eiders (Somateria fischeri) from the Yukon-Kuskokwim Delta, Alaska. Bulletin Environ. Contam. Toxicol. 75:760-767.
Yu, Qingyi, Moore, P. H., Albert, H. H., Roader, A. H. K., and Ming, R. (2005)Cloning and characterization of a FLORICAULA/LEAFY ortholog, PFL, in polygamous papaya. Cell Res. 15 (8):576-584
Zhu, Y. J., Agbayani, Ricelle, Albert, H., and Moore, P. H. (2005) Effective selection of transgenic papaya plants with the PMI/Man selection system. Plant Cell Rep 24:426-432.
2004Casaschi A, Maiyoh GK, Rubio B, Li RW, Adeli K, Theriault A (2004) The chalcone, xanthohumol, inhibits triglyceride and apolipoprotein B secretion in HepG2 cells. J Nutr 2004; 134: 1340-1346.
Casaschi A, Rubio B, Maiyoh GK, Theriault A (2004) Inhibitory activity of diacylglycerol acyltransferase (DGAT) and microsomal triglyceride transfer protein (MTP) by the flavonoid, taxifolin, in HepG2 cells: Potential role in the regulation of apolioprotein B secretion. Atherosclerosis 176: 247-253.
Denery J.; Dragull, K.; Tang, C.S.; Li, Q.X. (2004) Pressurized fluid extraction of kavalactones from Piper methysticum root. Anal. Chim. Acta. 501 (2): 175-181.
Denery JR, Dragull K, Tang CS, and QX Li (2004). Pressurized fluid extraction of carotenoids from Haematococcus pluvialis and Dunaliella salina and kavalactones from Piper methysticum. Analytica Chimica 501, 175–181
Hayden D.M. and D.A. Christopher (2004). Characterization of senescence-associated gene expression and senescence-dependent and -independent cysteine proteases differing in microsomal processing in Anthurium, Plant Science 166:779-790,
Hou, S.; Saw, J.; Lee, K.S.; Freitas, T.A.; Belisle, C.; Kawarabayasi, Y.; Donachie, S.P.; Galiperin, M.Y.; Koonin, E.V.; Makarova, K.S.; Omelchenko, M.V.; Sorokin, A.; Wolf, Y.I.; Li, Q.X.; Keum, Y.S.; Campbell, S.; Denery, J.; Aizawa, S.-I.; Shibata, S.; Malahoff, A.; Alam, M. (2004) Genome sequence of the deep-sea ?-Proteobacterium Idiomarina Ioihiensis reveals amino acid fermentation as source of carbon and energy. Proc Natl Acad Sci USA. 101 (52): 18036-18041.
Jin H-J, Dunn MA, Borthakur D, and Kim YS (2004) Refolding and purification of unprocessed porcine myostatin. Protein Expression and Purification 35:1-10.
Kato, C. Y. , Nagai, C., Moore, P. H., Zee, F., Kim, M. S., Steiger, D. L. and Ming, R. (2004) Intra-specific DNA polymorphism in pineapple (Ananas comosus (L.) Merr.) assessed by AFLP markers. Genetic Resources and Crop Evolution 51:815-825.
Kaufusi PH, Forsberg LS, Tittabutr P, and Borthakur D (2004) Regulation of exopolysaccharide synthesis in Rhizobium sp. strain TAL1145 involves an alternative sigma factor gene, rpoH2. Microbiology 150: 3473-3482.
Kim, H.-J.; Shelver, W.L.; Li, Q.X. (2004) Monoclonal antibody-based enzyme-linked immunosorbent assay for the insecticide imidacloprid. Anal. Chim. acta. 509 (1): 111-118.
Leary JK, Singleton PW and Borthakur D (2004) Canopy nodulation of the endemic tree legume Acacia koa in the mesic forests of Hawai‘i. Ecology 85: 3151-3157.
Liu, Z., Moore, P. H., Ma, Hao, Ackerman, C. M., Ragiba, M., Yu, Qingyi, Pearl, H. M., Kim, M. S., Charlton, J. W., Stiles, J. I., Zee, F. T., Paterson, A. H., and Ming, R. (2004) A primitive Y chromosome in papaya marks incipient sex chromosome evolution. Nature 427: 348-352.
Ma, Hao, Moore, P. H., Liu, Z., Kim, M. S., Yu, Qingyi, Fitch, M. M. M., Sekioka, T., Paterson, A. H. and Ming, R. (2004) High-density linkage mapping revealed suppression of recombination at the sex determination locus in papaya. Genetics 166: 419-436.
Ma, Hongmei, Schulze, S., Lee, S., Mirkov, E., Irvine, J., Moore, P. and Paterson, A. (2004) An EST survey of the sugarcane transcriptome. Theor Appl Genet 108: 851-863.
Nerurkar PV, Dragull KD, Tang CS (2004) Kava-associated hepatic toxicities: kava alkaloids and mitochondrial dysfunction. Toxicological Sciences 79:106-111.
Oh, B.-Y.; Li, Q.X.; Kim, J.H. (2004) Monitoring and assessment of pesticide residues in major river, arable soil and agricultural produce in Korea. In: Proceeding of the International Symposium on “Assessing and Rational Management of the Agro-ecosystem for Clean and Friendly Future Environment”; Hee-Myong Ro and Young-Hwan Park (Eds). Research Institute for Agricultural & Life Sciences, Seoul National University, Seoul, Korea. pp: 1-29.
Parambam, R.I. , Bugos, R., Su, W.W. (2004) Engineering green fluorescent protein as a dual functional tag. Biotechnol. Bioeng. 86 (6): 687-97.
Qiu, Xiaohui, Guan, Peizhu, Wang, M-L., Moore, P. H., Zhu, Y. J., Hu, J., Borth, W., and Albert, H. H. (2004) Identification and expression analysis of BTH induced genes in papaya. Physiol. Mol. Plant Pathol 65: 21-30.
Schenck, S., Crepeau, M. W., Wu, K. K., Moore, P. H., Yu, Qingyi and Ming, R. (2004) Genetic diversity and relationships in native Hawaiian Saccahrum officinarum sugarcane. J. Heredity 95:327-331.
Su, W.W., Guan, P.Z., Bugos, R. (2004) High level of secretion of functional green fluorescent protein from transgenic tobacco cell cultures: characterization and sensing. Biotechnol. Bioeng. 85(6), 610-9.
Zhu, Y. J., Agbayani, Ricelle, and Moore, P. H. (2004) Green fluorescent protein, as a positive selection marker, improves the efficiency of papaya (Carica papaya L.) transformation while avoiding selection for antibiotic resistance. Plant Cell Rep 22: 660-667.
Zhu, Y. J., Agbayani, Ricelle, Jackson, M.C., Tang, C.S., and Moore, P. H. (2004) Expression of the grapevine stilbene synthase gene VST1 in papaya provides increased resistance against disease caused by Phytophthora palmivora. Planta 220:241-250.
Zhu, Y. J., X. Qiu, Xiaohui, Moore, P. H., Borth, W, Hu, J, Ferreira, S, and Albert, H. H. (2004) Systemic acquired resistance induced by BTH in papaya. Physiological Molecular Plant Pathology 63 (5): 237-248.
Zhu, Y. J., X. Qiu, P. H. Moore, W. Borth, J. Hu, S. Ferreira and H. H. Albert (2004). "Systemic Acquired Resistance induced by BTH in papaya. Physiological and Molecular Plant Pathology63 (5): 237-248.
2003Awaya J, Fox PM and Borthakur D (2003) Genes encoding a fructose-1,6-bisphosphate aldolase and a fructose-1,6-bisphosphatase are present within the gene cluster for mimosine degradation in Rhizobium sp. strain TAL1145. Plant Soil 257: 11-18.
Borthakur D, Soedarjo, Fox PM, and Webb DT (2003) The mid genes of Rhizobium sp. strain TAL1145 are required for degradation of mimosine into 3-hydroxy-4-pyridone and are inducible by mimosine. Microbiology 149: 537-546.
Dragull K, Yoshida WY, Tang CS. (2003) Piperidine alkaloids from Piper methysticum. Phytochemistry. 63(2): 193-198.
Keum, Y.-S.; Kim, J.-H; Li, Q.X. (2003) Relationship between singlet oxygen formation and photolysis of phloxine B in aqueous solutions. J. Photoscience 10 (3): 219-223.
Kim, H. J.; Liu, S.-Z.; Keum, Y.S.; Hwang, E.C.; Li, Q.X. (2003) Improved enzyme-linked immunosorbent assay for the insecticide imidacloprid. In: Environmental Fate and Effects of Pesticides; J.R. Coats and H. Yamamoto (Eds.). ACS Symposium Series 853, Washington, DC. Pp 30-45.
Kim, H.-J.; Liu, S.-Z.; Keum, Y.-S.; Li, Q. X. (2003) Development of an enzyme-linked immunosorbent assay for the insecticide thiamethoxam. J. Agric. Food Chem. 51 (7): 1823-1830.
Kim, H.-J.; Shelver, W.L.; Keum, Y.-S.; Hwang, E.-C.; Li, Q.X. (2003) Enzyme-linked immunosorbent assays for the neonicotinoid insecticides. Agric. Chem. Biotechnol. 46 (4): 133-136.
Kim, J.H.; Moon, J.K.; Li, Q.X.; Cho, J.Y. (2003) One-step accelerated solvent extraction method for the analysis of polycyclic aromatic hydrocarbons. Anal. Chim. Acta 498: 55-60.
Su, W.W., Li, J., Xu, N.S. (2003) State and parameter estimation of microalgal photobioreactor cultures based on local irradiance measurement. J. Biotechnol. 105: 165-178.
Wei, H., M.-L. Wang, P. H. Moore and H. H. Albert (2003). Comparative expression analysis of two sugarcane polyubiquitin promoters and flanking sequences in transgenic plants. J Plant Physiol 160: 1241-1251.
Wei, Hairong, Wang, M-L, Moore, P. H. and Albert, H. H. (2003) Comparative expression analysis of two sugarcane polyubiquitin promoters and flanking sequences in transgenic plants. J. Plant Physiol. 160 (10): 1241-1251.
Yu, Qingyi, Alvarez, A. M., Moore, P. H., Kim, M. S., de Silva, A., Hepperly, P. R., Zee, F. and Ming, R. (2003) Molecular diversity of Ralstonia solanacearum ginger strains. Phytopathology 93: 1124-1130.
2002Keum, Y.-S.; Kim, J.-H. ; Kim, Y.-W.; Kim, K.; Li, Q.X. (2002) Photodegradation of diafenthiuron in water. Pest Management Science. 58 (5):496-502.
Saafi H and Borthakur D (2002) In vitro plantlet regeneration from cotyledon of the tree legume Leucaena leucocephala. Plant Growth Regulation 38:279-285.
2001Fox PM and Borthakur D. (2001) Selection of several classes of mimosine-degradation-defective Tn3Hogus-insertion mutants of Rhizobium sp. strain TAL1145 on the basis of mimosine-inducible GUS activity. Can J. Microbiol. 47: 488-494.
Ming, R., Moore, P. H., Zee, F., Abbey, C. A., Ma, Hao. and Paterson, A. H. (2001) Construction and characterization of a papaya BAC library as a foundation for molecular dissection of a tree-fruit genome. Theor Appl Genet 102: 892-899.
Shen Y, A. Danon, and D.A. Christopher (2001) RNA binding-proteins interact specifically with the Arabidopsis chloroplast psbA mRNA 5' untranslated region in a redox-dependent manner," Plant & Cell Physiology 42: 1071-1078.
2000Jin R-G, Liu Y-B, Tabashnik BE and Borthakur D. (2000) Development of transgenic cabbage (Brassica oleracea var. capitata) for insect resistance by Agrobacterium tumefaciens-mediated transformation. In Vitro Cellular Dev Biol Plant 36 (4): 231-237.
Ma, H., H. Albert, R. Paull and P. Moore (2000). Metabolic engineering of invertase activities in different subcellular compartments affects sucrose accumulation in sugarcane cells. Australian Journal of Plant Physiology 27 (11): 1021-1030.
Ma, Hongmei., Albert, H. H., Paull, R. and Moore, P. H. (2000) Metabolic engineering of invertase activities in different subcellular compartments affects sucrose accumulation in sugarcane cells. Aust. J. Plant Physiol. 27: 1021-1030.
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